Detail information of JCDBG00111
JCDBG00111
- ID
- JCDBG00111
- Name
- rps15
- Type
- protein_coding
- Scaffold
- NC_012224.1
- Start
- 132496
- End
- 132768
- Strand
- -
- Link
- Genbank id:7564804
- Molecular function
- GO:0003735 | structural constituent of ribosome
- Cellular component
- GO:0005840 | ribosome
GO:0005622 | intracellular - Biological process
- GO:0006412 | translation
- KEGG
- Entry: K02956
Name: RP-S15, MRPS15, rpsODefinition: small subunit ribosomal protein S15
ko03010: Ribosome - Source
- RefSeq
- TF
- Description
- Sequence
- TATGGTAAAAAATTCATTCATTTCGGTTATTTCACAAGAAGAAAAAAACGAAAACAAAGAATCCGTTGAATTTCAAATAG TAAGTTTCACTAATAAGATACGAAGACTTACTTCACATTTGGAATTGCATAGAAAAGACTATTCATCTCAGAGGGGTTTG CGGAAAATTCTAGGAAAACGTCAACGATCGCTGTCTTATTTAGCAAAGAAAAAGAGAGTACGTTATAAAGAATTAATTAG CCGGTTGGATATTCGGGAGTCAAAAATTCGTTA
- Gene structure
-
JCDB Genes gff download
JCDBG00111 's gene expression heatmap with it's positive (above) and negative (bellow) co-expressed neighboursMouse click the small gray square will display sample information.
JCDBR00110
- ID
- JCDBR00110
- Name
- rps15
- Type
- protein_coding
- Scaffold
- NC_012224.1
- Start
- 132496
- End
- 132768
- Strand
- -
- Exon
- 132496-132768
- Sequence
- TATGGTAAAAAATTCATTCATTTCGGTTATTTCACAAGAAGAAAAAAACGAAAACAAAGAATCCGTTGAATTTCAAATAG TAAGTTTCACTAATAAGATACGAAGACTTACTTCACATTTGGAATTGCATAGAAAAGACTATTCATCTCAGAGGGGTTTG CGGAAAATTCTAGGAAAACGTCAACGATCGCTGTCTTATTTAGCAAAGAAAAAGAGAGTACGTTATAAAGAATTAATTAG CCGGTTGGATATTCGGGAGTCAAAAATTCGTTA
- Product
- Source
- RefSeq
- Link:
JCDBP00076
- ID
- JCDBP00076
- Parent
- JCDBR00110
- Name
- YP_002720169.1
- Scaffold
- NC_012224.1
- CDS
- 132496-132768
- Strand:
- -
- Sequence
- MVKNSFISVISQEEKNENKESVEFQIVSFTNKIRRLTSHLELHRKDYSSQRGLRKILGKRQRSLSYLAKKKRVRYKELIS RLDIRESKIR
- Product
- rps15
- Source
- RefSeq
- Link
- YP_002720169.1
- InterProScan
- IPR000589 Ribosomal protein S15
IPR005290 Ribosomal protein S15, bacterial-type
IPR009068 S15/NS1, RNA-binding - Pfam
- PF00312.18 Ribosomal_S15 Domain
