JCDB: Jatropha curcas Database

• Gene
• Transcript

JCDBG00008

ID

JCDBG00008

Name

trnS-GCU

Type

tRNA

Scaffold

NC_012224.1

Start

7464

End

7551

Strand

-

Link

Genbank id:7636415

Molecular function

Cellular component

Biological process

KEGG

Source

RefSeq

TF

Description

Sequence

GGGAGAGATGGCTGAGTGGACTAAAGCGTCGGATTGCTAATCCGTTGTACGAGTTATTCGTACCGAGGGTTCGAATCCCT CTCTTTCC

Gene structure

JCDB Genes gff download

JCDBG00008 's gene expression heatmap with it's positive (above) and negative (bellow) co-expressed neighbours

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JCDBG00008's gene network (protein-protein interaction & gene co-expression among this gene and its Top10 neighbors)   

Node color:
Pumpkin: this gene;
Macaroni And Cheese : co-expression gene;
Forest Green :protein-interacting gene ;
Edge color:
Pelorous: co-expression;
Turquoise Blue HueBlue : protein protein interaction;

co-expression network

node1	node2	type	scc
JCDBG00008	JCDBG01399	co-exp	1
JCDBG00008	JCDBG15096	co-exp	0.710229
JCDBG00008	JCDBG00322	co-exp	0.697658
JCDBG01399	JCDBG15096	co-exp	0.710229
JCDBG01399	JCDBG00322	co-exp	0.697658

PPI network

node1	node2	type